HarvEST:Barley Screen Shots (similar to other HarvEST software)

Main Menu

 

Search ESTs by Expression Pattern

 

Search Results - Default is "Distribution Among Libraries"

 

Search Results - Alignment

 

Search Results - Sequence Alignment

 

View Members of Selected Unigene

 

Output all Sequences from Selected Unigene

 

View/Blast Consensus of Selected Unigene

 

Output the Above Unigene List

This function allows you to design and export a text file.

 

Create a Unigene/Assembly Cross-Reference

This function examines the EST content of each unigene in the query list and notes which unigenes contain them in the other assemblies.

 

Search By GenBank #, EST Name, or Unigene #

 

Search By Best Blast Hit Keyword (From Main Menu)

 

Find a Sequence Matching Your Favorite Gene (From Main Menu)

This function requires internet connection to link to NCBI.

 

Search the Barley Chip

This function path provides powerful probeset annotation and detailed viewing operations.  For a visual guide to the annotation method and examples of probeset details download the GeneChip_Support slides and view the animations in screen show mode.

 

Select a Different Assembly

 

Print Reports

This function path allows you to print several report tables or export tab-delimited files containing the same information.

 

Output a Unigene Set

 

HarvEST software and this web site copyright (c) 2001-2005  Steve Wanamaker and Timothy Close